Structure of PDB 3j7r Chain T Binding Site BS02

Receptor Information

>3j7r Chain T (length=159) Species: 9823 (Sus scrofa) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

TNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKG
MPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKS
RDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELL
EPIPYEFMA

Ligand information

>3j7r Chain 7 (length=120) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

gucuacggccauaccacccugaacgcgcccgaucucgucugaucucggaa
gcuaagcagggucgggccugguuaguacuuggaugggagaccgccuggga
auaccgggugcuguaggcuu

<<<<<<<<<....<<<<<<<<.....<<<<<..............>>>..
>>....>>>>>>.>><<<<<<<.....<<.<<..<<....>>.>>.>>..
..>>>>>>>>>>>>>>>>..

Receptor-Ligand Complex Structure

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Structure summary

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PDB	3j7r Structure of the Mammalian ribosome-sec61 complex to 3.4 a resolution.
Resolution	3.9 Å
Binding residue (original residue number in PDB)	R20 P26 A28
Binding residue (residue number reindexed from 1)	R19 P25 A27

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome

	Biological Process
GO:0006412	translation

	Cellular Component
GO:0005737	cytoplasm
GO:0005783	endoplasmic reticulum
GO:0005829	cytosol
GO:0005840	ribosome
GO:0022625	cytosolic large ribosomal subunit
GO:0031090	organelle membrane
GO:0043231	intracellular membrane-bounded organelle
GO:1990904	ribonucleoprotein complex

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External links

PDB	RCSB:3j7r, PDBe:3j7r, PDBj:3j7r
PDBsum	3j7r
PubMed	24930395
UniProt	P49666\|RL21_PIG Large ribosomal subunit protein eL21 (Gene Name=RPL21)

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