Structure of PDB 6cnd Chain S Binding Site BS02

Receptor Information
>6cnd Chain S (length=217) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AAAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAIQLKL
NPDGTMAIDEETMVVDRHKNASIENEYKEKVDENPFANLYNYGSYGRGSY
TDPWTVEEMIKFYKALSMWGTDFNLISQLYPYRSRKQVKAKFVNEEKKRP
ILIELALRSKLPPNFDEYCCEIKKNIGTVADFNEKLIELQNEHKHHMKEI
EEAKNTAKEEDQTAQRL
Ligand information
>6cnd Chain Y (length=61) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ccatggagtcattttatcttgtgtcacttacagaaaaagtattactaata
tatgttgaaaa
Receptor-Ligand Complex Structure
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PDB6cnd Structural visualization of RNA polymerase III transcription machineries.
Resolution4.8 Å
Binding residue
(original residue number in PDB)		N407 Y408 G409 Y416 K455
Binding residue
(residue number reindexed from 1)		N91 Y92 G93 Y100 K139
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0000995 RNA polymerase III general transcription initiation factor activity
GO:0001156 TFIIIC-class transcription factor complex binding
Biological Process
GO:0001112 DNA-templated transcription open complex formation
GO:0006355 regulation of DNA-templated transcription
GO:0006359 regulation of transcription by RNA polymerase III
GO:0006383 transcription by RNA polymerase III
GO:0070898 RNA polymerase III preinitiation complex assembly
Cellular Component
GO:0000126 transcription factor TFIIIB complex
GO:0005634 nucleus
GO:0005654 nucleoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6cnd, PDBe:6cnd, PDBj:6cnd
PDBsum6cnd
PubMed30083386
UniProtP46678|TFC5_YEAST Transcription factor TFIIIB component B'' (Gene Name=BDP1)

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