Structure of PDB 8rkv Chain R Binding Site BS02

Receptor Information
>8rkv Chain R (length=504) Species: 34078 (Scytonema hofmannii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KNVIATQLSEEAQVKLEVIQSLLEPCDRTTYGQKLREAAEKLNVSLRTVQ
RLVKNWEQDGLVGLTQTSRADKGKHRIGEFWENFITKTYKEGNKGSKRMT
PKQVALRVEAKARELKDSKPPNYKTVLRVLAPILEKQQKAKSIRSPGWRG
TTLSVKTREGKDLSVDYSNHVWQCDHTRVDVLLVDQHGEILSRPWLTTVI
DTYSRCIMGINLGFDAPSSGVVALALRHAILPKRYGSEYKLHCEWGTYGK
PEHFYTDGGKDFRSNHLSQIGAQLGFVCHLRDRPSEGGVVERPFKTLNDQ
LFSTLPGYTGSNVQERPEDAEKDARLTLRELEQLLVRYIVDRYNQSIDAR
MGDQTRFERWEAGLPTVPVPIPERDLDICLMKQSRRTVQRGGCLQFQNLM
YRGEYLAGYAGETVNLRFDPRDITTILVYRQENNQEVFLTRAHAQGLETE
QLALDEAEAASRRLRTAGKTISNQSLLQEVVDRDAKERQKLEQTVLRSAA
VDES
Ligand information
>8rkv Chain 3 (length=46) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
acgacagataatttgtcactgtacactacgccttttgtggagatgt
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8rkv Conformational landscape of the type V-K CRISPR-associated transposon integration assembly.
Resolution3.11 Å
Binding residue
(original residue number in PDB)
Q80 R81 K84 S98 R99 K102 G103 K104 R106 I107 N152 K154 R158 A246 S248 S249 K290 N295 R420
Binding residue
(residue number reindexed from 1)
Q50 R51 K54 S68 R69 K72 G73 K74 R76 I77 N122 K124 R128 A216 S218 S219 K260 N265 R390
External links