Structure of PDB 7zhg Chain R Binding Site BS02

Receptor Information
>7zhg Chain R (length=107) Species: 272844 (Pyrococcus abyssi GE5) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RDIGLRIQPPAEKCDDPKCPWHGHLKIHGRVFEGIVVSDKPRKTVTVERQ
YYHYLKKYERYELRRSRIHAHNPPCINAKVGDRVLIAETRPLSKTKHFVV
VAVLERA
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain7zhg Chain R Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7zhg Role of aIF5B in archaeal translation initiation.
Resolution2.25 Å
Binding residue
(original residue number in PDB)		C16 H24 C77
Binding residue
(residue number reindexed from 1)		C14 H22 C75
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7zhg, PDBe:7zhg, PDBj:7zhg
PDBsum7zhg
PubMed35694843
UniProtQ9V1U5|RS17_PYRAB Small ribosomal subunit protein uS17 (Gene Name=rps17)

[Back to BioLiP]