Structure of PDB 8uua Chain Q Binding Site BS02

Receptor Information
>8uua Chain Q (length=118) Species: 1642 (Listeria innocua) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ITKIDKNKVRKKRHARVRSKISGTESRPRLNVFRSNKNIYAQVIDDVNGV
TLASASNLDKDFGSAESKVDAASKVGELVAKRASEKGITSVTFDRGGYLY
HGRVKALAEAARENGLEF
Ligand information
>8uua Chain B (length=114) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
cugguaguuauggcgagaaggucacacccguucccaucccgaacacggua
guuaagcuucucugcgccaaugguaguugggggcuucccccugcgagagu
aggucgcugccggg
<<<<<<<<....<<<<<<<<.....<<<<<<.............>>>>..
>>....>>>>>>.>><<<.......<<.<<<<<...>>>>>.>>......
.>>>.>>>>>>>>.
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8uua Mechanistic insights into the alternative ribosome recycling by HflXr.
Resolution2.7 Å
Binding residue
(original residue number in PDB)		K4 D6 K7 R11 R19 R30 N32 F34 R35 S36 N37 K38 Y41 Q43 T52 S68 K69 V70 H102 R104
Binding residue
(residue number reindexed from 1)		K3 D5 K6 R10 R18 R29 N31 F33 R34 S35 N36 K37 Y40 Q42 T51 S67 K68 V69 H101 R103
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0008097 5S rRNA binding
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8uua, PDBe:8uua, PDBj:8uua
PDBsum8uua
PubMed38407413
UniProtA0A0U5AR65

[Back to BioLiP]