Structure of PDB 8jdl Chain Q Binding Site BS02
Receptor Information
>8jdl Chain Q (length=208) Species:
9606
(Homo sapiens) [
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APSRNGMVLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPA
SGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR
RRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLT
GPVMPVRNVYKKEKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKE
AAEQDVEK
Ligand information
>8jdl Chain F (length=156) [
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cgacucuuagcgguggaucacucggcucgugcgucgaugaagaacgcagc
uagcugcgagaauuaaugugaauugcaggacacauugaucaucgacacuu
cgaacgcacuugcggccccggguuccucccggggcuacgccugucugagc
gucgcu
.........................................<<<<<<.<<
.....>>>.....(.<<<.(....>>.........)...>>>..)...>>
>....<<....>><<<<<<<<<.....>>>>>>>>>..............
......
Receptor-Ligand Complex Structure
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PDB
8jdl
Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth.
Resolution
2.42 Å
Binding residue
(original residue number in PDB)
A30 R34
Binding residue
(residue number reindexed from 1)
A29 R33
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003723
RNA binding
GO:0003735
structural constituent of ribosome
GO:0005515
protein binding
Biological Process
GO:0001824
blastocyst development
GO:0002181
cytoplasmic translation
GO:0006412
translation
GO:0060348
bone development
Cellular Component
GO:0005634
nucleus
GO:0005730
nucleolus
GO:0005737
cytoplasm
GO:0005783
endoplasmic reticulum
GO:0005829
cytosol
GO:0005840
ribosome
GO:0016020
membrane
GO:0022625
cytosolic large ribosomal subunit
GO:0022626
cytosolic ribosome
GO:0045202
synapse
GO:1990904
ribonucleoprotein complex
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:8jdl
,
PDBe:8jdl
,
PDBj:8jdl
PDBsum
8jdl
PubMed
37992713
UniProt
P26373
|RL13_HUMAN Large ribosomal subunit protein eL13 (Gene Name=RPL13)
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