Structure of PDB 7oyb Chain P1 Binding Site BS02

Receptor Information
>7oyb Chain P1 (length=152) Species: 7955 (Danio rerio) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VRYSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKANKYLKDV
IVKHQCVPFRRYNGGVGRCAQAKQHDWTQGRWPKKSAEFLLHMLKNAESN
AELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILT
EK
Ligand information
>7oyb Chain 81 (length=150) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
aacucuuagcgguggaucacucggcucgugcgucgaugaagaacgcagcu
agcugcgagaacuaaugugaauugcaggacagaucaucgaccuuucgaac
gcacauugcggccccggguaucccggggccacgccugucugagggucgcc
........................................<<<<<<<((.
...>>>>.......<<<......)).........>>>......>>>....
<<.....>><<<<<<<<<...>>>>>>>>>....................
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7oyb A molecular network of conserved factors keeps ribosomes dormant in the egg.
Resolution2.4 Å
Binding residue
(original residue number in PDB)
R3 S5 R30 R61 R62 W78 N120 K121 P123 H145
Binding residue
(residue number reindexed from 1)
R2 S4 R29 R60 R61 W77 N119 K120 P122 H144
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:7oyb, PDBe:7oyb, PDBj:7oyb
PDBsum7oyb
PubMed36653451
UniProtQ7T1K0

[Back to BioLiP]