Structure of PDB 8xqx Chain P Binding Site BS02

Receptor Information
>8xqx Chain P (length=617) Species: 3055 (Chlamydomonas reinhardtii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DLSRPAESLPARADEAAVQAALADDGGWVGTPDPSKYAAGTTQLSARELQ
EEVAKGNVMTWKDFKQQVSGLQGPEREALLALVAQRVAAERMFFTLEDGS
KVSLWDLQQYVDNNPELAALAASVRRIAVADPEDPAGRPLPGGGASGLDR
SRGLTGAAHMSGQEAEELELDWGQVGRGALWRRRPTRWLLGGLDGVKDWE
LEAYAHEPLANQLLGAKYGGRDPRAVVADPAYAADVLRAGPLLGMTFVLR
AARDLPLQEVASSWRGLLGNYLQRQAPLSLPKAVRPAHLDPTDLNGVAWP
ALLSRPAAAAHAAAEAEAAGAVPDDEMGVAWRVQSGKEAAASVAAAQQLL
QSLPDALCPGPSPAAWPLTGTKLVDEGGRNWRRGGSVWVTLQPEGGVLVQ
AQTGGVVGEQESYLLTHVQGQEALAGAVMSAFMGPQPLDPELAAAARSVL
LVPANGFTAANKERDPNHPLYPSFTGVRPGRAPRDVAAYTLAGGRTPLLA
AGGPGEAKLASELRTVMEAALAAAARAEAEALADAATSPSSTSSRAAPAA
ALAEAEAAEARRARGRAAAAAVMAEGLRRLGPDAVAMLERTAAEAEAPQG
GGAVTSSDIFSLARTLE
Ligand information
Ligand IDA1LXL
InChIInChI=1S/C29H50O/c1-7-21(19(2)3)9-8-20(4)25-12-13-26-24-11-10-22-18-23(30)14-16-28(22,5)27(24)15-17-29(25,26)6/h10,19-21,23-27,30H,7-9,11-18H2,1-6H3/t20-,21+,23+,24+,25-,26+,27+,28+,29-/m0/s1
InChIKeyKZJWDPNRJALLNS-USLLMGQYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7CC[C@H](CC[C@H](C)[C@@H]1CC[C@H]2[C@]1(CC[C@@H]3[C@@H]2CC=C4[C@]3(CC[C@H](C4)O)C)C)C(C)C
CACTVS 3.385CC[CH](CC[CH](C)[CH]1CC[CH]2[CH]3CC=C4C[CH](O)CC[C]4(C)[CH]3CC[C]12C)C(C)C
CACTVS 3.385CC[C@H](CC[C@H](C)[C@@H]1CC[C@@H]2[C@H]3CC=C4C[C@H](O)CC[C@@]4(C)[C@@H]3CC[C@@]12C)C(C)C
OpenEye OEToolkits 2.0.7CCC(CCC(C)C1CCC2C1(CCC3C2CC=C4C3(CCC(C4)O)C)C)C(C)C
FormulaC29 H50 O
Name(3~{R},8~{R},9~{R},10~{S},13~{S},14~{R},17~{S})-17-[(2~{S},5~{R})-5-ethyl-6-methyl-heptan-2-yl]-10,13-dimethyl-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1~{H}-cyclopenta[a]phenanthren-3-ol;
(3~{R},8~{R},9~{R},10~{S},13~{S},14~{R},17~{S})-17-[(2~{S},5~{R})-5-ethyl-6-methyl-heptan-2-yl]-10,13-dimethyl-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1~{H}-cyclopenta[a]phenanthren-3-ol
ChEMBL
DrugBank
ZINC
PDB chain8xqx Chain P Residue 702 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8xqx Conservation and specialization of the Ycf2-FtsHi chloroplast protein import motor in green algae.
Resolution2.8 Å
Binding residue
(original residue number in PDB)
L305 W320 L323 L324 L409 F488
Binding residue
(residue number reindexed from 1)
L249 W264 L267 L268 L353 F432
Annotation score1
External links