Structure of PDB 7ohp Chain P Binding Site BS02
Receptor Information
>7ohp Chain P (length=98) Species:
559292
(Saccharomyces cerevisiae S288C) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
NPAKSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLEQVLWPAKSVK
FVQGLLQNAAANAEAKGLDATKLYVSHIQVNQAPKESSPSHIELVVTE
Ligand information
>7ohp Chain 2 (length=149) [
Search RNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
aaacuuucaacaacggaucucuugguucucgcaucgaugaagaacgcagc
gaaaugcgauacguaaugugaauugcagaauuccgugaaucaucgaaucu
uugaacgcaccgccccuugccagggggcaugccuguuugagcgucauuu
.........................................<<<<<<<<<
....>>>>.....<.<<<......>>..............>>>..>...>
>>....<...><<<<.<<<.>>>.>>>>.....................
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
7ohp
Analysis of subunit folding contribution of three yeast large ribosomal subunit proteins required for stabilisation and processing of intermediate nuclear rRNA precursors.
Resolution
3.9 Å
Binding residue
(original residue number in PDB)
Q118 N120 Q121 A122 P123
Binding residue
(residue number reindexed from 1)
Q79 N81 Q82 A83 P84
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003735
structural constituent of ribosome
Biological Process
GO:0000448
cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0002181
cytoplasmic translation
GO:0006412
translation
Cellular Component
GO:0005737
cytoplasm
GO:0005829
cytosol
GO:0005840
ribosome
GO:0015934
large ribosomal subunit
GO:0022625
cytosolic large ribosomal subunit
GO:0030687
preribosome, large subunit precursor
GO:1990904
ribonucleoprotein complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:7ohp
,
PDBe:7ohp
,
PDBj:7ohp
PDBsum
7ohp
PubMed
34813592
UniProt
P05740
|RL17A_YEAST Large ribosomal subunit protein uL22A (Gene Name=RPL17A)
[
Back to BioLiP
]