Structure of PDB 2d2c Chain P Binding Site BS02

Receptor Information
>2d2c Chain P (length=286) Species: 83541 (Mastigocladus laminosus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
YPFWAQQTYPPTPREPTGRIVCANCHLAAKPAEVEVPQSVLPDTVFKAVV
KIPYDTKLQQVAADGSKVGLNVGAVLMLPEGFKIAPEERIPEELKKEVGD
VYFQPYKEGQDNVLLVGPLPGEQYQEIVFPVLSPNPTTDKNIHFGKYAIH
LGANRGRGQIYPTGEKSNNNVFTASATGTITKIAKEEDEYGNVKYQVSIQ
TDSGKTVVDTIPAGPELIVSEGQAVKAGEALTNNPNVGGFGQDDTEIVLQ
DPNRVKWMIAFICLVMLAQLMLILKKKQVEKVQAAE
Ligand information
Ligand IDBNT
InChIInChI=1S/C10H10Br2O2/c1-4(2)6-8(12)9(13)5(3)7(11)10(6)14/h4H,1-3H3
InChIKeyGHHZELQYJPWSMG-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04BrC1=C(C(=O)C(Br)=C(C1=O)C(C)C)C
CACTVS 3.341CC(C)C1=C(Br)C(=O)C(=C(Br)C1=O)C
OpenEye OEToolkits 1.5.0CC1=C(C(=O)C(=C(C1=O)Br)C(C)C)Br
FormulaC10 H10 Br2 O2
Name2,5-DIBROMO-3-ISOPROPYL-6-METHYLBENZO-1,4-QUINONE;
2,5-DIBROMO-3-METHYL-6-ISOPROPYLBENZOQUINONE;
DBMIB
ChEMBLCHEMBL1231418
DrugBankDB04646
ZINCZINC000002011646
PDB chain2d2c Chain O Residue 1309 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB2d2c Intraprotein transfer of the quinone analogue inhibitor 2,5-dibromo-3-methyl-6-isopropyl-p-benzoquinone in the cytochrome b6f complex
Resolution3.8 Å
Binding residue
(original residue number in PDB)		Y147 A148
Binding residue
(residue number reindexed from 1)		Y147 A148
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005506 iron ion binding
GO:0009055 electron transfer activity
GO:0020037 heme binding
GO:0046872 metal ion binding
Biological Process
GO:0015979 photosynthesis
Cellular Component
GO:0009579 thylakoid
GO:0016020 membrane
GO:0031676 plasma membrane-derived thylakoid membrane
GO:0042651 thylakoid membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:2d2c, PDBe:2d2c, PDBj:2d2c
PDBsum2d2c
PubMed16371475
UniProtP83793|CYF_MASLA Cytochrome f (Gene Name=petA)

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