Structure of PDB 9bcu Chain M Binding Site BS02

Receptor Information
>9bcu Chain M (length=648) Species: 311400 (Thermococcus kodakarensis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MIRRETFVDDILKEIREIIVQMVPREAGITDVEFEGPELVIYVKNPEAMM
KDGELIKNLAKVLKKRISVRPDPDILLPPEKAEELIKQLVPPEAEITNIS
FDPSVGEVLIEARKPGLVIGKNGETLRLITQKVHWAPRVVRTPPIQSQTI
YSIRSILQTESKDRRKFLRQVGRNIYRKSEYKSRWIRITGLGGFREVGRS
ALLVQTDESYVLVDFGVNIAALKDPTKAYPHFDAPEFRYVLDEGLLDAII
ITHAALDHSGMLPYLFRYKLFDGPIYTTPPTRDLMTLLQQDFIEIQHMNG
VEPLYRPKDIKEVIKHTITLDYGEVRDIAPDIRLTLHNAGHILGSSIVHL
HIGNGLHNIAITGDFKFIPTRLFEPAVSRFPRLETLVMESTYGGSNDYQM
PREEAEKRLIEVIHQTLKRGGKVLIPAMAVGRAQEIMMVLEEYARVGGIE
VPIYLDGMIWEATAIHTAYPEYLSKHIREQIFHEGYNPFLNPIFKSVANS
RERQDIIDSGEPAIIIATSGMLVGGPSVEYFKQLAPDPKNSIIFVSYQAE
GTLGRQVQRGLREIPIVGEDGRTEVINVNMEVHTIDGFSGAADRRELMSY
VARVRPRPERIITVHGEAHKCLDLSSSIHKKFGISTRAPNNLDAIRLK
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain9bcu Chain M Residue 701 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB9bcu Structural basis of archaeal FttA-dependent transcription termination
Resolution2.2 Å
Binding residue
(original residue number in PDB)		H258 D364 H615
Binding residue
(residue number reindexed from 1)		H258 D364 H615
Annotation score4
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003723 RNA binding
GO:0004519 endonuclease activity
GO:0004521 RNA endonuclease activity
GO:0004527 exonuclease activity
GO:0046872 metal ion binding
Biological Process
GO:0006353 DNA-templated transcription termination

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Molecular Function
View graph for
Biological Process
External links
PDB RCSB:9bcu, PDBe:9bcu, PDBj:9bcu
PDBsum9bcu
PubMed
UniProtQ5JH24|FTTA_THEKO Transcription termination factor FttA (Gene Name=fttA)

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