Structure of PDB 8ys2 Chain M Binding Site BS02

Receptor Information
>8ys2 Chain M (length=79) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KCEPSQFQCTNGRCITLLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCNN
GQCVPSRWKCDGDPDCEDGSDESPEQCHM
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain8ys2 Chain M Residue 202 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8ys2 The receptor VLDLR binds Eastern Equine Encephalitis virus through multiple distinct modes.
Resolution5.2 Å
Binding residue
(original residue number in PDB)		W89 D92 D94 D96 D102 E103
Binding residue
(residue number reindexed from 1)		W58 D61 D63 D65 D71 E72
Annotation score4
External links
PDB RCSB:8ys2, PDBe:8ys2, PDBj:8ys2
PDBsum8ys2
PubMed39127734
UniProtP98155|VLDLR_HUMAN Very low-density lipoprotein receptor (Gene Name=VLDLR)

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