Structure of PDB 6s13 Chain M Binding Site BS02

Receptor Information
>6s13 Chain M (length=119) Species: 1280 (Staphylococcus aureus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MISKIDKNKVRLKRHARVRTNLSGTAEKPRLNVYRSNKHIYAQIIDDNKG
VTLAQASSKDSDIATTATKVELATKVGEAIAKKAADKGIKEIVFDRGGYL
YHGRVKALAEAARESGLEF
Ligand information
>6s13 Chain B (length=115) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ucuggugacuauagcaaggaggucacaccuguucccaugccgaacacaga
aguuaagcuccuuagcgucgaugguagucgaacuuacguuccgcuagagu
agaacguugccaggc
.<<<<..<.....<.<<<<<<.......<<<...............>>>.
.......>>>>>>..>.<<......<<<.<<<<....>>>>.>>>.....
.>>...>..>>>>..
Receptor-Ligand Complex Structure
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PDB6s13 Exit tunnel modulation as resistance mechanism of S. aureus erythromycin resistant mutant.
Resolution3.58 Å
Binding residue
(original residue number in PDB)		K4 K7 R11 H15 R19 R30 N32 Y34 R35 S36 N37 K38 H39 Y41 Q43 I45 G50 V51 T52 Q55 K59 T68 K69 V70 H102 G103 R104
Binding residue
(residue number reindexed from 1)		K4 K7 R11 H15 R19 R30 N32 Y34 R35 S36 N37 K38 H39 Y41 Q43 I45 G50 V51 T52 Q55 K59 T68 K69 V70 H102 G103 R104
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0008097 5S rRNA binding
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6s13, PDBe:6s13, PDBj:6s13
PDBsum6s13
PubMed31391518
UniProtW8TRE0

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