Structure of PDB 6ddg Chain M Binding Site BS02

Receptor Information
>6ddg Chain M (length=56) Species: 1280 (Staphylococcus aureus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AKLQITLTRSVIGRPETQRKTVEALGLKKTNSSVVVEDNPAIRGQINKVK
HLVTVE
Ligand information
>6ddg Chain 2 (length=104) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
gugacuauagcaaggaggucacaccuguucccaugccgaacacagaaguu
aagcuccuuagcgucgaugguagucgaacuuacguuccgcuagaguagaa
cguu
<........<<<<<<<<.....<<<<<...............>>>..>>.
...>>>>>>.>>.<......<<<..<........>..>..>>....>...
...>
Receptor-Ligand Complex Structure
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PDB6ddg cryoEM-Guided Development of Antibiotics for Drug-Resistant Bacteria.
Resolution3.1 Å
Binding residue
(original residue number in PDB)		R15 Q19
Binding residue
(residue number reindexed from 1)		R14 Q18
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6ddg, PDBe:6ddg, PDBj:6ddg
PDBsum6ddg
PubMed30667174
UniProtP0A0G2|RL30_STAA8 Large ribosomal subunit protein uL30 (Gene Name=rpmD)

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