Structure of PDB 1pp8 Chain M Binding Site BS02

Receptor Information

>1pp8 Chain M (length=118) Species: 5722 (Trichomonas vaginalis)

MDSNDLEASFTSRLPPEIVAALKRKSSRDPNSRFPRKLHMLLTYLASNPQ
LEEEIGLSWISDTEFKMKKKNVALVMGIKLNTLNVNLRDLAFEQLQHDKG
GWTQWKRSGFTRNSVFED

Ligand information

>1pp8 Chain R (length=12)

catgtgaagtga

Receptor-Ligand Complex Structure

Structure summary

• PDB: 1pp8 Structural Basis of Core Promoter Recognition in a Primitive Eukaryote
• Resolution: 3.05 Å
• Binding residue (original residue number in PDB): K25 K69
• Binding residue (residue number reindexed from 1): K25 K69
• Binding affinity: PDBbind-CN: Kd=190nM

External links

• PDB: RCSB:1pp8, PDBe:1pp8, PDBj:1pp8
• PDBsum: 1pp8
• PubMed: 14622596
• UniProt: Q95VR4