Structure of PDB 7zjx Chain Lm Binding Site BS02

Receptor Information

>7zjx Chain Lm (length=86) Species: 9986 (Oryctolagus cuniculus)

TKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSA
KAKRRNTTGTGRMRHLKIVYRRFRHGFREGTTPKPK

Ligand information

>7zjx Chain L8 (length=156)

cgacucuuagcgguggaucacucggcucgugcgucgaugaagaacgcagc
uagcugcgagaauuaaugugaauugcaggacacauugaucaucgacacuu
cgaacgcacuugcggccccggguuccucccggggcuacgccugucugagc
gucgcu

.........................................<<<<<<<<<
....>>>>.....<.<<<......>>.............>>>..>...>>
>....<<....>><<<<<<<<<.....>>>>>>>>>..............
......

Receptor-Ligand Complex Structure

Structure summary

• PDB: 7zjx Structure of the mammalian ribosome as it decodes the selenocysteine UGA codon.
• Resolution: 3.1 Å
• Binding residue (original residue number in PDB): R20 R21 K42 T59 G62 R63 M64 R65 H66 L67 K68 Y71 R72 F74 R75 H76 R79 E80 G81 T82 P84 K87
• Binding residue (residue number reindexed from 1): R19 R20 K41 T58 G61 R62 M63 R64 H65 L66 K67 Y70 R71 F73 R74 H75 R78 E79 G80 T81 P83 K86

Gene Ontology

Molecular Function

• GO:0003723 RNA binding
• GO:0003735 structural constituent of ribosome
• GO:0019843 rRNA binding
• GO:0046872 metal ion binding

Biological Process

• GO:0006412 translation

Cellular Component

• GO:0005737 cytoplasm
• GO:0005840 ribosome
• GO:0022625 cytosolic large ribosomal subunit
• GO:1990904 ribonucleoprotein complex

External links

• PDB: RCSB:7zjx, PDBe:7zjx, PDBj:7zjx
• PDBsum: 7zjx
• PubMed: 35709277
• UniProt: U3KPD5|RL37_RABIT Large ribosomal subunit protein eL37 (Gene Name=RPL37)