Structure of PDB 8i9w Chain Lj Binding Site BS02

Receptor Information
>8i9w Chain Lj (length=74) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KTHGLCRRCGRRSLHNQKKVCASCGYPAAKTRKYNWSEKAKRRKVTGTGR
MRYLSTVPRRFKNGFRTGVPKGAR
Ligand information
>8i9w Chain C2 (length=256) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
aaacuuucaacaacggaucucuugguucuggcaucgaugaagaacgcagc
gaaaugcgauaaguaaugugaauugcagaauuccgugaaucaucgaaucu
uugaacgcacauugcgcccgccgguauuccggcgggcaugccuguucgag
cgucauuucaaccaucaagcccugggcuuguguuggggacccgcggcugc
ucgcgggcccugaaaagcaguggcgggcucgcuggcgggugccagccgua
aaaccc
.........................................<<<<<<<((
....>>>>.....<.<<<<.....))............>.>>>..>...>
>>....<<.....>><<<<<<<<<....>>>>>>>>>.............
...............<<<<<<...>>>>>>....<<<<.<<<<<<<....
>>>>>>>>>>>..........<<<<<<<<<<<..>>>>>>.>>.>>>...
......
Receptor-Ligand Complex Structure
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PDB8i9w Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis.
Resolution3.1 Å
Binding residue
(original residue number in PDB)		R20 R21 C22 L27 A42 T59 G62 R63 M64 Y66 L67 R72 F74 K75 N76 R79 G81 P83 R87
Binding residue
(residue number reindexed from 1)		R7 R8 C9 L14 A29 T46 G49 R50 M51 Y53 L54 R59 F61 K62 N63 R66 G68 P70 R74
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
GO:0046872 metal ion binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8i9w, PDBe:8i9w, PDBj:8i9w
PDBsum8i9w
PubMed37129998
UniProtG0S101

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