Structure of PDB 7mq9 Chain LU Binding Site BS02

Receptor Information
>7mq9 Chain LU (length=445) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MKVKMLSRNPDNYVRETKLDLQRVPRNYDPALHPFEVPREYIRALNATKL
ERVFAKPFLASLDGHRDGVNCLAKHPEKLATVLSGACDGEVRIWNLTQRN
CIRTIQAHEGFVRGICTRFCGTSFFTVGDDKTVKQWKMDGPGYGDEEEPL
HTILGKTVYTGIDHHWKEAVFATCGQQVDIWDEQRTNPICSMTWGFDSIS
SVKFNPIETFLLGSCASDRNIVLYDMRQATPLKKVILDMRTNTICWNPME
AFIFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTGKEFVSA
SFDKSIRIFPVDKSRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIR
LWKANASEKLGVLTSREKAAKDYNQKLKEKFQHYPHIKRIARHRHLPKSI
YSQIQEQRIMKEARRRKEVNRIKHSKPGSVPLVSEKKKHVVAVVK
Ligand information
>7mq9 Chain L2 (length=215) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
gacuauacuuucagggaucauuucuauaguguguuacuagagaaguuucu
cugaacguguagagcaccgaaaaccacgaggaagagagguagcguuuucu
ccugagcgugaagccggcuuucuggcguugcuuggcugcaacugccguca
gccauugaugaucguucuucucuccguauuggggagugagagggagagaa
cgcggucugaguggu
..................................................
.......................<<<<.....<<.......<<<<<<<<<
<<<....<.......<<<<....<<<.<<<<......>>>>..>>>...>
>>>.........>..<<<<<<<<<<.....>>>>>>.>>>>>>>>>>>>>
>>>...>>..>>>>.
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7mq9 Nucleolar maturation of the human small subunit processome.
Resolution3.87 Å
Binding residue
(original residue number in PDB)		R15 K18 K49 L50 R52 F54 K56 P57 F58 S61 E318 Y320 K323 R324 R350 S357 K359 T364 R366 E367 H395
Binding residue
(residue number reindexed from 1)		R15 K18 K49 L50 R52 F54 K56 P57 F58 S61 E318 Y320 K323 R324 R350 S357 K359 T364 R366 E367 H395
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0005515 protein binding
GO:0030331 nuclear estrogen receptor binding
GO:1990756 ubiquitin-like ligase-substrate adaptor activity
Biological Process
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0001555 oocyte growth
GO:0006364 rRNA processing
GO:0007056 spindle assembly involved in female meiosis
GO:0016567 protein ubiquitination
GO:0042254 ribosome biogenesis
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0044725 epigenetic programming in the zygotic pronuclei
GO:0046697 decidualization
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005730 nucleolus
GO:0005813 centrosome
GO:0005829 cytosol
GO:0030054 cell junction
GO:0032040 small-subunit processome
GO:0080008 Cul4-RING E3 ubiquitin ligase complex
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7mq9, PDBe:7mq9, PDBj:7mq9
PDBsum7mq9
PubMed34516797
UniProtQ9NV06|DCA13_HUMAN DDB1- and CUL4-associated factor 13 (Gene Name=DCAF13)

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