Structure of PDB 8pv8 Chain LJ Binding Site BS02

Receptor Information
>8pv8 Chain LJ (length=168) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AQNPMRELRIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTV
RQFGIRRNEKIAVHVTVRGPKAEEILERGLKVKEYELRRRNFSETGNFGF
GISEHIDLGIKYDPSIGIYGMDFYCCMTRPGERVAKRRRCKSRIGASHRI
TREETIRWFKQRFDGIVR
Ligand information
>8pv8 Chain C4 (length=115) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
acguacgaccauacccaguggaaagcacggcaucccguccgcucugcccu
aguuaagccacugagggcccgguuaguaguugggucgggaccagcgaauc
ccggguguuguacgu
<<<<<<<<<....<<<<<<<<.....<<<<<<............>>>>..
.>>....>>>>>>.>><<<<<<......<<<<<.......>>>>>.....
>>>>>>>>>>>>>>>
Receptor-Ligand Complex Structure
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PDB8pv8 Structural insights into coordinating 5S RNP rotation with ITS2 pre-RNA processing during ribosome formation.
Resolution2.91 Å
Binding residue
(original residue number in PDB)
N8 M10 R11 Q44 T45 T71 R73 G136 R138 V139 K141 R142 R143 S147 G150 H153
Binding residue
(residue number reindexed from 1)
N3 M5 R6 Q39 T40 T66 R68 G131 R133 V134 K136 R137 R138 S142 G145 H148
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:8pv8, PDBe:8pv8, PDBj:8pv8
PDBsum8pv8
PubMed37921038
UniProtG0SHQ2

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