Structure of PDB 8oo0 Chain LJ Binding Site BS02

Receptor Information
>8oo0 Chain LJ (length=167) Species: 209285 (Thermochaetoides thermophila) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QNPMRELRIQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVR
QFGIRRNEKIAVHVTVRGPKAEEILERGLKVKEYELRRRNFSETGNFGFG
ISEHIDLGIKYDPSIGIYGMDFYCCMTRPGERVAKRRRCKSRIGASHRIT
REETIRWFKQRFDGIVR
Ligand information
>8oo0 Chain 3 (length=119) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
acauacgaccauaccuaguggaaaacucgggaucccguccgcucucccau
agauaagccacuaagggcgggguuaguacucaggucggugacgacugggg
aaucccccguguuguaugu
<<<<<<<<<....<<<<<<<<.....<<<<<..............>>>..
.>>....>>>>>>.>><<<<<<......<<<<<..<<....>>.>>>>>.
....>>>>>>>>>>>>>>>
Receptor-Ligand Complex Structure
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PDB8oo0 Methionine aminopeptidase 2 and its autoproteolysis product have different binding sites on the ribosome.
Resolution3.1 Å
Binding residue
(original residue number in PDB)		M10 Q44 T45 V47 T71 R73 G136 R138 R142 R148 G150 H153
Binding residue
(residue number reindexed from 1)		M4 Q38 T39 V41 T65 R67 G130 R132 R136 R142 G144 H147
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8oo0, PDBe:8oo0, PDBj:8oo0
PDBsum8oo0
PubMed38267453
UniProtG0SHQ2

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