Structure of PDB 6zj3 Chain L2 Binding Site BS02

Receptor Information
>6zj3 Chain L2 (length=51) Species: 3039 (Euglena gracilis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MMEPTLQALARKYNCEKMVCRKCYARLPLRSHNCRSKMCGHTSELRMKKK
L
Ligand information
>6zj3 Chain LI (length=573) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ggugcgagccugcagugaaauaccacuaccuucaccguuguuuuacucau
cgaguugcaagagagcgguggccaugcuuuccccgauucaugcaccaagu
cugcagcagcuguuguggacgacucacgugucacaguccgaucagucucg
aaacaucgaucaguuggggaguuuggcuggggcggcacgccuuuuacaac
acaacgaaggcguccugaagcauugcucaggcagaacagaaaucucccag
ggaggagaaggccaaaggugcugcugaugcugcgacucucaguacgaguc
cgaaacgugcaaucguggccuaacgauccuuuggucaagugugcgaauuc
uggauaucgaagccagaggugucagaaaaauuaccacagggauaacuggc
uuguggcugccaagcguucaaagcgacgucgcuuuuugauccuucgaugu
cggcucuuccuagcuucccacccgcagccgaguggaagaguuggauuguu
cacccaccaacagggaacgugagcuggguuuagaccgucgugagacaggu
ugguuuuacccuccugccacaga
.................................................<
<<<<......<<<..<<<.<<.........>>>>>.............<<
<<<<<<<<..>>>>>>>>>>..>>>...<......>..........>>>>
>........................<<<.....>>>..<<<<<<......
.....>>>>>>..<<....<<<.<<<...<<.<<<.......>>>.>>..
...<<...(((>>....>>>.>>>.........<<<<<.......>>>>>
.....<<......>>.>>))).......<<<<<<<............<<<
........>>>>>>>>>>.............................<<.
<...<<<.<<...<<.......>>...>>.>>>....>.>.>.......<
<<<<.<<<<<<..<<<<<.<<.<......>.>>>>..>>>.<<<......
...>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>
>......................
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6zj3 Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis.
Resolution3.15 Å
Binding residue
(original residue number in PDB)		V93 R95 Y98 R100 M112 E118 R120 K122 K123 L125
Binding residue
(residue number reindexed from 1)		V19 R21 Y24 R26 M38 E44 R46 K48 K49 L51
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Fri Nov 15 22:19:51 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '6zj3', asym_id = 'L2', bs = 'BS02', title = 'Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='6zj3', asym_id='L2', bs='BS02', title='Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0003735,0005840,0006412', uniprot = '', pdbid = '6zj3', asym_id = 'L2'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003735,0005840,0006412', uniprot='', pdbid='6zj3', asym_id='L2')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>