Structure of PDB 7paq Chain L Binding Site BS02

Receptor Information
>7paq Chain L (length=118) Species: 272634 (Mycoplasmoides pneumoniae M129) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LGIDIPNQKRIEIALTYIFGIGLSRSQAILKQANINPDKRVKDLTEEEFV
AIRNVASAYKIEGDLRREIALNIKHLSEIGAWRGLRHRKNLPVRGQRTRT
NARTRKGPRKTVANKKIE
Ligand information
>7paq Chain 7 (length=76) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ggucuuguagcucagucgguagagcaacggucugaagaaccgugugucgg
caguucgauucugcccgagaccacca
<<<<<<<..<<<<........>>>>.<<<<<.......>>>>>.....<<
<<<.......>>>>>>>>>>>>....
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7paq Visualizing translation dynamics at atomic detail inside a bacterial cell.
Resolution8.9 Å
Binding residue
(original residue number in PDB)		K119 I121
Binding residue
(residue number reindexed from 1)		K115 I117
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005829 cytosol
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7paq, PDBe:7paq, PDBj:7paq
PDBsum7paq
PubMed36171285
UniProtQ50297|RS13_MYCPN Small ribosomal subunit protein uS13 (Gene Name=rpsM)

[Back to BioLiP]