Structure of PDB 8bpo Chain K2 Binding Site BS02
Receptor Information
>8bpo Chain K2 (length=210) Species:
9986
(Oryctolagus cuniculus) [
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APSRNGMILKPHFHKDWQRRVATWFNQPARKIRRRKARQARARRIAPRPA
AGPIRPIVRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPR
RRNKSTESLQANVQRLKEYRSKLVLFPRKPSAPKKGDSSAEELKLATQLT
GPVMPIRNVFKKEKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKE
AAEQDVEKKK
Ligand information
>8bpo Chain C1 (length=151) [
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cgacucuuagcgguggaucacucggcucgugcgucgaugaagaacgcagc
uagcugcgagaauuaaugugaauugcagguugaucaucgacacuucgaac
gcacuugcggccccggguuccucccggggcuacgccugucugagcgucgc
u
.........................................<<<<<<<<<
....>>>>.....<.<<<......>>........>>>..>...>>>....
<<<..>>><<<<<<<<.......>>>>>>>>...................
.
Receptor-Ligand Complex Structure
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PDB
8bpo
Mechanism of ribosome-associated mRNA degradation during tubulin autoregulation.
Resolution
2.8 Å
Binding residue
(original residue number in PDB)
F26 N27 A30 R34
Binding residue
(residue number reindexed from 1)
F25 N26 A29 R33
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003723
RNA binding
GO:0003735
structural constituent of ribosome
Biological Process
GO:0006412
translation
Cellular Component
GO:0005737
cytoplasm
GO:0005840
ribosome
GO:0022625
cytosolic large ribosomal subunit
GO:1990904
ribonucleoprotein complex
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:8bpo
,
PDBe:8bpo
,
PDBj:8bpo
PDBsum
8bpo
PubMed
37295431
UniProt
G1TKB3
|RL13_RABIT Large ribosomal subunit protein eL13 (Gene Name=RPL13)
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