Structure of PDB 8ifm Chain K Binding Site BS02

Receptor Information
>8ifm Chain K (length=428) Species: 1393122 (Thermoflavifilum thermophilum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MKELIYIEEPSILFAHGQKCTDPRDGLALFGPLNQIYGIKSGVVGTQKGL
QIFKSYLDKIQKPIYNHNNITRPMFPGFEAVFGCKWESQNIVFKEITKRT
YDLVTLFNDKIITANKNDEERVDVWFVIVPEYDAQFHDQLKARLLEHTIP
TQILRESTLAWRDFKNTFGAPIRDFSKIEGHLAWTISTAAYYKAGGKPWK
LGPGVCYLGLVYKKIQNACCAAQMFLDNGDGTVFKGEVGPWYNPEKGEYH
LKPKEAKALLTQALESYKEQNKSYPKEVFIHARTRFNDEEWNAFNEVTPK
NTNLVGVTITKSKPLKLYKTEGAFPIMRGNAYIVDEKKAFLWTLGFVPKL
QSTLSMEVPNPIFIEINKGEAEIQQVLKDILALTKLNYNACIYADGEPVT
LRFANKIGEILTASTEIKTPPLAFKYYI
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8ifm Target ssDNA activates the NADase activity of prokaryotic SPARTA immune system.
Resolution2.92 Å
Binding residue
(original residue number in PDB)		N68 I70 T71 R72 I248 Y285 K286 K287 Y328 R362 T363 R364 A402 F403 S431 T432 L433 S434 M435
Binding residue
(residue number reindexed from 1)		N68 I70 T71 R72 I178 Y212 K213 K214 Y249 R283 T284 R285 A323 F324 S352 T353 L354 S355 M356
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding

View graph for
Molecular Function
External links
PDB RCSB:8ifm, PDBe:8ifm, PDBj:8ifm
PDBsum8ifm
PubMed37932528
UniProtA0A1I7NFD7

[Back to BioLiP]