Structure of PDB 6ywv Chain K Binding Site BS02

Receptor Information

>6ywv Chain K (length=157) Species: 367110 (Neurospora crassa OR74A) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

GSWLEPNLNRKKKMMKGRPRVPTGGSTKGTTVVWGDYGLRMRDHHRRISA
QQLKLAEDTIKQRLRGQKYRLYKRVACNVGVYVSSFDHWATRVAVNQIIF
EIRGQLHEQVIRDAFRLAGHKLPGLYEFVKKGDPPVVGITKLEDGLTVED
LKNPRKK

Ligand information

Ligand ID

InChI

InChI=1S/Mg/q+2

InChIKey

JLVVSXFLKOJNIY-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Mg+2]
CACTVS 3.341	[Mg++]

Formula

Name

MAGNESIUM ION

PDB chain

6ywv Chain K Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	6ywv Analysis of translating mitoribosome reveals functional characteristics of translation in mitochondria of fungi.
Resolution	3.03 Å
Binding residue (original residue number in PDB)	G190 H191 L193 G195
Binding residue (residue number reindexed from 1)	G119 H120 L122 G124
Annotation score	4

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0003735	structural constituent of ribosome
GO:0019843	rRNA binding

	Biological Process
GO:0006412	translation
GO:0032543	mitochondrial translation

	Cellular Component
GO:0005739	mitochondrion
GO:0005762	mitochondrial large ribosomal subunit
GO:0005840	ribosome
GO:1990904	ribonucleoprotein complex

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Cellular Component

External links

PDB	RCSB:6ywv, PDBe:6ywv, PDBj:6ywv
PDBsum	6ywv
PubMed	33056988
UniProt	F5HIJ5\|RM16_NEUCR Large ribosomal subunit protein uL16m (Gene Name=mrpl16)

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