Structure of PDB 4ly6 Chain K Binding Site BS02
Receptor Information
>4ly6 Chain K (length=247) Species:
63363
(Aquifex aeolicus) [
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EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRS
KEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFL
DEIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNIKELV
KEGKFREDLYYRLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVE
GFTKSAQELLLSYPWYGNVRELKNVIERAVLFSEGKFIDRGELSCLV
Ligand information
Ligand ID
MG
InChI
InChI=1S/Mg/q+2
InChIKey
JLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341
[Mg++]
Formula
Mg
Name
MAGNESIUM ION
ChEMBL
DrugBank
DB01378
ZINC
PDB chain
4ly6 Chain K Residue 401 [
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Receptor-Ligand Complex Structure
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PDB
4ly6
Nucleotide-induced asymmetry within ATPase activator ring drives sigma 54-RNAP interaction and ATP hydrolysis.
Resolution
3.6 Å
Binding residue
(original residue number in PDB)
D238 E239
Binding residue
(residue number reindexed from 1)
D101 E102
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005524
ATP binding
GO:0008134
transcription factor binding
GO:0016887
ATP hydrolysis activity
Biological Process
GO:0006355
regulation of DNA-templated transcription
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Molecular Function
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Biological Process
External links
PDB
RCSB:4ly6
,
PDBe:4ly6
,
PDBj:4ly6
PDBsum
4ly6
PubMed
24240239
UniProt
O67198
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