Structure of PDB 4ic1 Chain K Binding Site BS02
Receptor Information
>4ic1 Chain K (length=202) Species:
273057
(Saccharolobus solfataricus P2) [
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YFQGMITEFLLKKKLEEHLSHVKEENTIYVTDLVRCPRRVRYESEYKELA
ISQVYAPSAILGDILHLGLESVLKGNFNAETEVETLREINVGGKVYKIKG
RADAIIRKSIVIEIKTSRSDKGLPLIHHKMQLQIYLWLFSAEKGILVYIT
PDRIAEYEINEPLDEATIVRLAEDTIMLQNSPRFNWECKYCIFSVICPAK
LT
Ligand information
Ligand ID
SF4
InChI
InChI=1S/4Fe.4S
InChIKey
LJBDFODJNLIPKO-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 2.0.7
[S]12[Fe]3[S]4[Fe]1[S]5[Fe]2[S]3[Fe]45
CACTVS 3.385
S1[Fe]S[Fe]1.S2[Fe]S[Fe]2
Formula
Fe4 S4
Name
IRON/SULFUR CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain
4ic1 Chain K Residue 302 [
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Receptor-Ligand Complex Structure
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PDB
4ic1
Toroidal structure and DNA cleavage by the CRISPR-associated [4Fe-4S] cluster containing Cas4 nuclease SSO0001 from Sulfolobus solfataricus.
Resolution
2.35 Å
Binding residue
(original residue number in PDB)
C32 P182 C188 C191 C197 K200
Binding residue
(residue number reindexed from 1)
C36 P182 C188 C191 C197 K200
Annotation score
4
Enzymatic activity
Enzyme Commision number
3.1.12.1
: 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming).
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0004527
exonuclease activity
GO:0030145
manganese ion binding
GO:0045145
single-stranded DNA 5'-3' DNA exonuclease activity
GO:0046872
metal ion binding
GO:0051539
4 iron, 4 sulfur cluster binding
Biological Process
GO:0006308
DNA catabolic process
GO:0032508
DNA duplex unwinding
GO:0051607
defense response to virus
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Molecular Function
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Biological Process
External links
PDB
RCSB:4ic1
,
PDBe:4ic1
,
PDBj:4ic1
PDBsum
4ic1
PubMed
24171432
UniProt
Q97TX9
|CAS4_SACS2 CRISPR-associated exonuclease Cas4 (Gene Name=cas4)
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