Structure of PDB 2ww9 Chain K Binding Site BS02

Receptor Information
>2ww9 Chain K (length=83) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LDSYKVIEQPITSETAMKKVEDGNILVFQVSMKANKYQIKKAVKELYEVD
VLKVNTLVRPNGTKKAYVRLTADYDALDIANRI
Ligand information
>2ww9 Chain F (length=25) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ccacgucaacagcaguuggacgugg
<<<<<<...<<.....>>.>>>>>>
Receptor-Ligand Complex Structure
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PDB2ww9 Structure of Monomeric Yeast and Mammalian Sec61 Complexes Interacting with the Translating Ribosome.
Resolution8.6 Å
Binding residue
(original residue number in PDB)		E70 R115
Binding residue
(residue number reindexed from 1)		E14 R59
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0019843 rRNA binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:0030687 preribosome, large subunit precursor
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:2ww9, PDBe:2ww9, PDBj:2ww9
PDBsum2ww9
PubMed19933108
UniProtP04456|RL25_YEAST Large ribosomal subunit protein uL23 (Gene Name=RPL25)

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