Structure of PDB 8it1 Chain J Binding Site BS02
Receptor Information
>8it1 Chain J (length=450) Species:
1393122
(Thermoflavifilum thermophilum) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MRNKIFISHATPEDDDFTRWLSLKLIGLGYEVWCDILFLDKGVDFWSTIE
KEIRENTCKFLIVSSTAGNKREGVLKELAVATKVKKHLQDDMFIIPLAID
ENLSYDDINIEIVRLNAIDFKKSWAKGLQDLLDAFEKQNVPKKPPDHSKS
NLLYQQIFLHDKQAIEKEETYDSNWFPIISFPNELRFHRYDWRLPKQFDV
RTLAFPAIRYKEYLCTFAWEYDFIHQLPKTETYNGQESIRISTSDILSGR
YDTDFIRNYECQRLIVQLINKAFELRMKDKNVREYQMSKTFAYWIEKGKL
EKDKFEKIKLVGKQKNKYWHFGISAAGKLYPSPVLMVSSHIIFTMDGINL
IKSKSIQHSSRRKQGKNWWNDKWREKLLAFIRFLSDDQNAIYLNVGSEEK
ILISNKPLKFFGKMSYVTPSEVTLEEESVLADINNFEEDTEDLDELEDIE
Ligand information
>8it1 Chain L (length=21) [
Search RNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
ugagguaguagguuguauagu
.....................
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8it1
Nucleic acid-triggered NADase activation of a short prokaryotic Argonaute.
Resolution
3.41 Å
Binding residue
(original residue number in PDB)
K196 Y210 K211 Y259 Y285 M287 H340 K354 Q357 H358 R361 R362 N434 E438
Binding residue
(residue number reindexed from 1)
K196 Y210 K211 Y259 Y285 M287 H340 K354 Q357 H358 R361 R362 N434 E438
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Biological Process
GO:0007165
signal transduction
View graph for
Biological Process
External links
PDB
RCSB:8it1
,
PDBe:8it1
,
PDBj:8it1
PDBsum
8it1
PubMed
37783228
UniProt
A0A1I7NFG5
[
Back to BioLiP
]