Structure of PDB 8eyz Chain J Binding Site BS02

Receptor Information
>8eyz Chain J (length=222) Species: 562 (Escherichia coli) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KKLVVATDTAFVPFEFKQGDIYVGFDVDLWAAIAKELKLDYELKPMDFSG
IIPALQTKNVDLALAGITICDERKKAIDFSDGYYKSGLLVMVKANNNDVK
SVKDLDGKVVAVKSGTGSVDYAKANIKTKDLRQFPNIDNAYMELGTNRAD
AVLHDTPNILYFIKTAGNGQFKAVGDSLEAQQYGIAFPKGSDELRDKVNG
ALKTLRENGTYNEIYKKWFGTE
Ligand information
Ligand IDX5Z
InChIInChI=1S/C7H7N.2C4H8N2O2.Co.N3/c1-2-7-3-5-8-6-4-7;2*1-3(5-7)4(2)6-8;;1-3-2/h2-6H,1H2;2*7-8H,1-2H3;;/q;2*-2;+6;-1/b;2*4-3-;;
InChIKeyKKXSWROVWVQWSY-GLPMUSQESA-N
SMILES
SoftwareSMILES
ACDLabs 12.01C=Cc1cc[n+](cc1)[Co]12(\N=[N+]=[N-])(N(O)C(C)=C(C)N1O)N(O)C(C)=C(C)N2O
CACTVS 3.385CC1=C(C)N(O)[Co]2(N=[N+]=[N-])(N1O)(N(O)C(=C(C)N2O)C)[n+]3ccc(C=C)cc3
OpenEye OEToolkits 2.0.7CC1=C(N([Co]2(N1O)(N(C(=C(N2O)C)C)O)(N=[N+]=[N-])[n+]3ccc(cc3)C=C)O)C
FormulaC15 H23 Co N8 O4
NameAZIDOBIS (DIMETHYLGLYOXIMATO) PYRIDINECOBALT
ChEMBL
DrugBank
ZINC
PDB chain8eyz Chain J Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8eyz Engineering a Conformationally Switchable Artificial Metalloprotein.
Resolution2.99 Å
Binding residue
(original residue number in PDB)		C72 D122
Binding residue
(residue number reindexed from 1)		C70 D120
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0015276 ligand-gated monoatomic ion channel activity
GO:0070406 glutamine binding
Biological Process
GO:0006865 amino acid transport
GO:0006868 glutamine transport
GO:0034220 monoatomic ion transmembrane transport
GO:1903803 L-glutamine import across plasma membrane
Cellular Component
GO:0016020 membrane
GO:0030288 outer membrane-bounded periplasmic space
GO:0042597 periplasmic space
GO:0055052 ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8eyz, PDBe:8eyz, PDBj:8eyz
PDBsum8eyz
PubMed36378237
UniProtP0AEQ3|GLNH_ECOLI Glutamine-binding periplasmic protein (Gene Name=glnH)

[Back to BioLiP]