Structure of PDB 8ebt Chain J Binding Site BS02

Receptor Information
>8ebt Chain J (length=70) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRD
GDGEVSEQEFLRIMKKTSLY
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain8ebt Chain J Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8ebt Lesion recognition by XPC, TFIIH and XPA in DNA excision repair.
Resolution3.9 Å
Binding residue
(original residue number in PDB)
D152 D154 E156 V157 S158 E161
Binding residue
(residue number reindexed from 1)
D50 D52 E54 V55 S56 E59
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005509 calcium ion binding

View graph for
Molecular Function
External links
PDB RCSB:8ebt, PDBe:8ebt, PDBj:8ebt
PDBsum8ebt
PubMed37076618
UniProtP41208|CETN2_HUMAN Centrin-2 (Gene Name=CETN2)

[Back to BioLiP]