Structure of PDB 8av6 Chain J Binding Site BS02
Receptor Information
>8av6 Chain J (length=647) Species:
209285
(Thermochaetoides thermophila) [
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RDEPWKRLPPPTVYPVKEARFEKYIPPQLDGRERALAQPPGQVAIVIDNG
SHSVRAGWNFEDKPRLAIPPIMSKYRDRKMGKTFSFAGSDCYAARSHIRN
AFEAGTGIVSNWDVMEHVLDYVFVKLGMNEDMPIVMTEAVANLPYSRKSM
SEIIFECYGAPSLVYGIDSLFSFRHNQGQTGLVVSSSYSATHVIPVYNRK
ALLSQAIRLNWGGWHMAEYMLKLLKLKYYTGFPGKLNSSQTEHMVRDFCY
VSLDYDRELAGYLDWTGLEDRERIVQYPEEELARIAERKKESGRRLQEQA
AKMRLERLMKKEQELEYYKDIQRRMQGESKKEIKRLLDEAELKDEAALER
VIRDLERSIKRARQQRLLKSNWEARQRAKAEKEAEKARLAEEARLDEERR
KNDLEGWLEEKRQLRLAKLNQLKERERLKADLGNRKSLASQIRMKNIANL
ALEAAIRSLENDLLRYDKTFSYDMTLDAQRDWSKSLLHAFRYGPRPFDPS
SQAETHRVHLNVERIRVPEVLFQPAAIAGVDQAGLVEIAGDILCQRLPSL
PGIQDAPDAFLRDVFLTGGNTLFQNFDERLRQGLMALLPVGAPLRVRRAQ
DAILDAWRGAAGWACTEEAKAAWITREEYLEKGGEYIKEHDLGNAFA
Ligand information
Ligand ID
ATP
InChI
InChI=1S/C10H16N5O13P3/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(26-10)1-25-30(21,22)28-31(23,24)27-29(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H,23,24)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@@](=O)(O)O[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@](O)(=O)O[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
Formula
C10 H16 N5 O13 P3
Name
ADENOSINE-5'-TRIPHOSPHATE
ChEMBL
CHEMBL14249
DrugBank
DB00171
ZINC
ZINC000004261765
PDB chain
8av6 Chain J Residue 801 [
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Receptor-Ligand Complex Structure
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PDB
8av6
Structural mechanism of extranucleosomal DNA readout by the INO80 complex.
Resolution
4.68 Å
Binding residue
(original residue number in PDB)
G64 S65 H66 S209 Y210 R268 G691 L694 F695
Binding residue
(residue number reindexed from 1)
G50 S51 H52 S187 Y188 R246 G569 L572 F573
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:8av6
,
PDBe:8av6
,
PDBj:8av6
PDBsum
8av6
PubMed
36490333
UniProt
G0S589
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