Structure of PDB 6lqm Chain J Binding Site BS02

Receptor Information
>6lqm Chain J (length=154) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RIFDLGRKKAKVDEFPLGGHMVSDEYEQLSSEALEAARICANKYMVKSCG
RDGFHMRVRLHPFHTVARVHIGQVIMSIRTKLQNEEHVIEALRRAKFKFP
GRQKIHISKKWGFTKFNADEFEDMVAKKCLIPDGCGVKYVPSHGPLDKWR
VLHS
Ligand information
>6lqm Chain 5 (length=120) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
gucuacggccauaccacccugaacgcgcccgaucucgucugaucucggaa
gcuaagcagggucgggccugguuaguacuuggaugggagaccgccuggga
auaccgggugcuguaggcuu
<<<<<<<<<....<<<<<<<<.....<<<<<..............>>>..
>>....>>>>>>.>><<<<<<<.....<<.<<..<<....>>.>>.>>..
..>>>>>>>>>>>>>>>>..
Receptor-Ligand Complex Structure
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PDB6lqm Structural snapshots of human pre-60S ribosomal particles before and after nuclear export.
Resolution3.09 Å
Binding residue
(original residue number in PDB)		E56 Y57 Y199 S202 H203 G204 P205 W209
Binding residue
(residue number reindexed from 1)		E25 Y26 Y139 S142 H143 G144 P145 W149
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0006412 translation
GO:0007141 male meiosis I
GO:0007283 spermatogenesis
GO:0030154 cell differentiation
GO:0051321 meiotic cell cycle
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005783 endoplasmic reticulum
GO:0005829 cytosol
GO:0005840 ribosome
GO:0016020 membrane
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6lqm, PDBe:6lqm, PDBj:6lqm
PDBsum6lqm
PubMed32669547
UniProtQ96L21|RL10L_HUMAN Ribosomal protein uL16-like (Gene Name=RPL10L)

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