Structure of PDB 6lc1 Chain J Binding Site BS02
Receptor Information
>6lc1 Chain J (length=86) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYICLANKDCPVDKR
RRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLP
Ligand information
>6lc1 Chain L (length=25) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
cctggcatttggaggtaaatatcac
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6lc1
Structural basis of NR4A1 bound to the human pituitary proopiomelanocortin gene promoter.
Resolution
3.12 Å
Binding residue
(original residue number in PDB)
R293 R316 N317 Q320 R323 R346 G347 R348
Binding residue
(residue number reindexed from 1)
R29 R52 N53 Q56 R59 R82 G83 R84
Binding affinity
PDBbind-CN
: Kd=135.33nM
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003700
DNA-binding transcription factor activity
GO:0008270
zinc ion binding
GO:0043565
sequence-specific DNA binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:6lc1
,
PDBe:6lc1
,
PDBj:6lc1
PDBsum
6lc1
PubMed
31822342
UniProt
P22736
|NR4A1_HUMAN Nuclear receptor subfamily 4immunitygroup A member 1 (Gene Name=NR4A1)
[
Back to BioLiP
]