Structure of PDB 5eix Chain J Binding Site BS02

Receptor Information
>5eix Chain J (length=679) Species: 573 (Klebsiella pneumoniae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GKLADCTAQDLNRTELFLVEGDSAGGSAKQARDREYQAIMPLKGKILNTW
EVSSDEVLASQEVHDISVAIGIDPDSDDLSQLRYGKICILADADSDGLHI
ATLLCALFVRHFRTLVKEGHVYVALPPLYRIVYYALTEEEKTGVLEQLKR
QRFKGLGEMNPMQLRETTLDPNTRRLVQLVISDEDEQQTTAIMDMLLAKK
RSEDRRNWLQEKGERLALHEFTENAYLNYSMYVIMDRALPFIGDGLKPVQ
RRIVYAMSELGLNASAKFKKSARTVGDVLGKYHPHGDSACYEAMVLMAQP
FSYRYPLGDGQGNWGAPKSFAAMRYTESRLSKYAELLLSELGQGTVDWVP
NFDGTLQEPKMLPARLPNILLNGTTGIAVGMATDIPPHNLREVAKAAITL
IEQPKTTLDELLDIVQGPDFPTEAEIITSRAEIRKIYQNGRGSVRMRAVW
SITALPHQVSGAKVLEQIAAQMRNKKLPMVDDLRDESDHENPTRLVIVPR
SNRVDMEQVMNHLFATTDLEKSYRINLNMIGLDGRPAVKNLLEILSEWLV
FRRDTVRRRLNHRLEKVLKRLHILEGLLVAFLNIDEVIEIIRTEDEPKPA
LMSRFGISETQAEAILELKLRHLAKLEEMKIRGEQSELEKERDQLQAILA
SERKMNNLLKKELQADADAFGDDRRSPLH
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5eix Structure of a quinolone-stabilized cleavage complex of topoisomerase IV from Klebsiella pneumoniae and comparison with a related Streptococcus pneumoniae complex.
Resolution3.35 Å
Binding residue
(original residue number in PDB)		K444 I445 L446 N447 H498 R616 R617 Y1018 R1119 Y1120 I1172 G1175 M1176 R1326
Binding residue
(residue number reindexed from 1)		K45 I46 L47 N48 H99 R205 R206 Y226 R324 Y325 I377 G380 M381 R524
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Mon Nov 25 13:58:49 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '5eix', asym_id = 'J', bs = 'BS02', title = 'Structure of a quinolone-stabilized cleavage com...with a related Streptococcus pneumoniae complex. '
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='5eix', asym_id='J', bs='BS02', title='Structure of a quinolone-stabilized cleavage com...with a related Streptococcus pneumoniae complex. ')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0003677,0003918,0005524,0005694,0006259,0006265', uniprot = '', pdbid = '5eix', asym_id = 'J'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003677,0003918,0005524,0005694,0006259,0006265', uniprot='', pdbid='5eix', asym_id='J')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>