Structure of PDB 5it7 Chain II Binding Site BS02

Receptor Information
>5it7 Chain II (length=207) Species: 28985 (Kluyveromyces lactis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RRPARCYRYQKNKPYPKSRYNRAVPDSKIRIYDLGKKKATVDEFPLCVHL
VSNELEQLSSEALEAARITANKYITKMTGRDSFHLRVRVHPFHVLRINKM
QQGMRGAWGKPHGLAARVAIGQVIFSVRTKDNNKDTVIEGLRRARYKFPG
QQKIIISKKWGFTSLNREEYVKKRDAGEIKDDGAFVKFLSKKGSLEENIR
EFPEYFA
Ligand information
>5it7 Chain 7 (length=121) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
gguugcggccauaucuaccagaaagcaccguuucccguccgaucaacugu
aguuaagcugguaagagccugaccgaguaguguagugggugaccauacgc
gaaacucaggugcugcaaucu
<<<<<<<<<....<<<<<<<<.....<<.<<..............>>...
.>>....>>>>>>.>><<<<<<.......<<<<<..<<....>>.>>>>>
.....>>>>>>>>>>>>>>>.
Receptor-Ligand Complex Structure
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PDB5it7 Structural characterization of ribosome recruitment and translocation by type IV IRES.
Resolution3.6 Å
Binding residue
(original residue number in PDB)		Y11 E56 I131 K202 K203 G204 S205 L206
Binding residue
(residue number reindexed from 1)		Y9 E54 I120 K191 K192 G193 S194 L195
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5it7, PDBe:5it7, PDBj:5it7
PDBsum5it7
PubMed27159451
UniProtQ6CRX7

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