Structure of PDB 8adl Chain I Binding Site BS02

Receptor Information
>8adl Chain I (length=633) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SSGLIYTTKVDKELSSIDKVNDPNINGLVCATHLGLYKFSPSDRSIKCVH
DFITIADVKTGFNNYKNCIAVCNNSTAISIYDLNKSSSIDNPLITSLCEH
TRSINSFDFNMVESNLIISGGQDSCVKIWDLRSRSDISINTASDSIRDVK
WMPGYNFASGYKFASIHDSGYLLKFDLRQPAQYEKKLNAHTGPGLCLNWH
PNQEYIATGGRDGKCCLWFVGFPKLTINTGYPVTKLKFKPAYSSNIYNSL
LGISSMGDEAEVRIYSLARKYIPKHVLLSETPSLGLVWWDENLIFNIDKG
TRINGWDINKEPTVLENLSKNTTTWRDLDGNGLLSVDQEIGSYEVAIEPP
CIITLDIPQIFNNIRLTKIAHNSPVEKFKYLARQLKFSYIVEAELQEKIQ
TLVDLISIATHNASVYLSIDDLTNFKIWILIRDSLLWDLKWMTSSIADPP
WDTKKLIKQLYNQATETGNVVLTVNILFLFQTIYQITEIDIAKDAIAHFL
LLLHRYELFGIAADVLKYCPFEDIMGSEGDQSSIRLFCERCGELITNESS
KEKLRAEAQQTGNKKIMDKFGYWYCDSCKKKNTSCVLCERPLKKLTMVIL
PCGHEGHFQCIQEWFLDENEQECPGGCPGVAFI
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain8adl Chain I Residue 1402 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8adl Cryo-EM structure of the SEA complex.
Resolution2.95 Å
Binding residue
(original residue number in PDB)
C1246 C1283 C1286
Binding residue
(residue number reindexed from 1)
C538 C575 C578
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0008270 zinc ion binding
GO:0046872 metal ion binding
Biological Process
GO:0015031 protein transport
GO:0016239 positive regulation of macroautophagy
GO:0032008 positive regulation of TOR signaling
GO:1903432 regulation of TORC1 signaling
GO:1904263 positive regulation of TORC1 signaling
Cellular Component
GO:0000324 fungal-type vacuole
GO:0005773 vacuole
GO:0005774 vacuolar membrane
GO:0005829 cytosol
GO:0016020 membrane
GO:0035859 Seh1-associated complex
GO:0061700 GATOR2 complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:8adl, PDBe:8adl, PDBj:8adl
PDBsum8adl
PubMed36289347
UniProtQ08281|RTC1_YEAST Restriction of telomere capping protein 1 (Gene Name=RTC1)

[Back to BioLiP]