Structure of PDB 6v7b Chain I Binding Site BS02

Receptor Information
>6v7b Chain I (length=119) Species: 1805492 (Pyrobaculum filamentous virus 1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
IAETLTEKHTLGIEKVVATDSWRVGITSREKKLERINISAEISRRIQDEA
IAYARNKGIPYLPGINGIAWKLLRLKWLGYTDQINVVMRTVPAEWRDFLT
QIMENTQMESMYSELRKVR
Ligand information
>6v7b Chain 2 (length=323) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
tatatatatatatatatatatatatatatatatatatatatatatatata
tatatatatatatatatatatatatatatatatatatatatatatatata
tatatatatatatatatatatatatatatatatatatatatatatatata
tatatatatatatatatatatatatatatatatatatatatatatatata
tatatatatatatatatatatatatatatatatatatatatatatatata
tatatatatatatatatatatatatatatatatatatatatatatatata
tatatatatatatatatatatat
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6v7b Structure of a filamentous virus uncovers familial ties within the archaeal virosphere.
Resolution3.4 Å
Binding residue
(original residue number in PDB)		L14 H18 G21 V25 W31 I35 K41 R44 S48 G76 I77 W79 K80
Binding residue
(residue number reindexed from 1)		L5 H9 G12 V16 W22 I26 K32 R35 S39 G67 I68 W70 K71
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0019029 helical viral capsid
GO:0044423 virion component

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:6v7b, PDBe:6v7b, PDBj:6v7b
PDBsum6v7b
PubMed32368353
UniProtA0A140F3K6|CAPS1_PFV1 Major capsid protein 1

[Back to BioLiP]