Structure of PDB 6y63 Chain HHH Binding Site BS02

Receptor Information
>6y63 Chain HHH (length=256) Species: 1634381 (Sheep polyomavirus 1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SITEIEAYLNPRMGQPQNEDFYGFSDNVTVSDDFGSDAPPWKQFPCYSTA
RISLPMLNQDSDTILMWEAISCRTEVMGVNMLTNVHSAQKRVYENDREGT
GIGVEGMGYHMFAIGGEPLELQFMVFNHRATYPAEATVIKNPGASSQVFD
PNLKGTLTADGVFPVEAWGPDPFKNENTRYFGQYTGGTQTPPVLTFTNTQ
TTILLDENGVGPLCKGDGLFLSCADIVGFFTQHNKKMSFRGLPRYFRVTL
RKRVVK
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain6y63 Chain GGG Residue 304 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6y63 Structural Basis and Evolution of Glycan Receptor Specificities within the Polyomavirus Family.
Resolution1.651 Å
Binding residue
(original residue number in PDB)		F207 E210
Binding residue
(residue number reindexed from 1)		F173 E176
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Cellular Component
GO:0019028 viral capsid

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:6y63, PDBe:6y63, PDBj:6y63
PDBsum6y63
PubMed32723915
UniProtA0A0E3ZCF3

[Back to BioLiP]