Structure of PDB 8ydb Chain H Binding Site BS02
Receptor Information
>8ydb Chain H (length=322) Species:
2053611
(Selenomonas sp.) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
LKSRPENLSFARCLNTTEAKFWQTDFLKRHTFKLPLLITDKAVLASKGHE
MPPDKLEKEIMDPNPQKSQSCTLSTECDTLRIDFGIKVLPVKESMYSCSD
YNYRTAIYQKIDEYIAEDGFLTLAKRYVNNIANARFLWRNRKGAEIIETI
VTIEDKEYPSFNSKSFNLDTFVEDNATINEIAQQIADTFAGKREYLNIYV
TCFVKIGCAMEVYPSQEMTFDDDDKGKKLFKFEGSAGMHSQKINNALRTI
DTWYPDYTTYEFPIPVENYGAARSIGIPFRPDTKSFYKLIDRMILKNEDL
PIEDKHYVMAILIRGGMFSKKQ
Ligand information
>8ydb Chain T (length=32) [
Search RNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
gtggccttattaaatgacttctccgctaatac
................................
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8ydb
Mechanisms for HNH-mediated target DNA cleavage in type I CRISPR-Cas systems
Resolution
3.4 Å
Binding residue
(original residue number in PDB)
K58 D73 P74 N75 P76 Q77 F231 M328 K332
Binding residue
(residue number reindexed from 1)
K47 D62 P63 N64 P65 Q66 F220 M317 K321
External links
PDB
RCSB:8ydb
,
PDBe:8ydb
,
PDBj:8ydb
PDBsum
8ydb
PubMed
39047725
[
Back to BioLiP
]
