Structure of PDB 8p0j Chain H Binding Site BS02
Receptor Information
>8p0j Chain H (length=382) Species:
10245
(Vaccinia virus) [
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MDNLFTFLHEIEDRYARTIFNFHLISCDEIGDIYGLMKERISSEDMFDNI
VYNKDIHPAIKKLVYCDIQLTKHIINQNTYPVFNDSSQVKCCHYFDINSD
NSNISSRTVEIFEREKSSLVSYIKTTNKKRKVNYGEIKKTVHGGTNANYF
SGKKSDEYLSTTVRSNINQPWIKTISKRMRVDIINHSIVTRGKSSILQTI
EIIFTNRTCVKIFKDSTMHIILSKDKDEKGCIHMIDKLFYVYYNLFLLFE
DIIQNEYFKEVANVVNHVLTATALDEKLFLIKKMAEHDVYGVSNFKIGMF
NLTFIKSLDHTVFPSLLDEDSKIKFFKGKKLNIVALRSLEDCINYVTKSE
NMIEMMKERSTILNSIDIETESVDRLKELLLK
Ligand information
>8p0j Chain T (length=36) [
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gggatggagtaattgtaaattatttaaagttaaatg
Receptor-Ligand Complex Structure
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PDB
8p0j
Cryo EM map and model of the vaccinia RNA polymerase intermediate pre-initiation open promoter complex (CASP target)
Resolution
2.39 Å
Binding residue
(original residue number in PDB)
T18 I19 N21 S121 Y122 T125 K129 K193 S195 I196 R207 K211 I221 S223 K224 K327
Binding residue
(residue number reindexed from 1)
T18 I19 N21 S121 Y122 T125 K129 K193 S195 I196 R207 K211 I221 S223 K224 K327
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:8p0j
,
PDBe:8p0j
,
PDBj:8p0j
PDBsum
8p0j
PubMed
UniProt
P20998
|VITF3_VACCC Intermediate transcription factor 3 large subunit (Gene Name=OPG150)
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