Structure of PDB 8jla Chain H Binding Site BS02
Receptor Information
>8jla Chain H (length=93) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASRLA
HYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA
Ligand information
>8jla Chain J (length=156) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
ctaggatcacaatcccggtgccgaggccgctcaattggtcgtagacagct
ctagcaccgcttaaacgcacgtacggattccgtacgtgcgtttaagcggt
gctagagctgtctacgaccaattgagcggcctcggcaccgggattgtgat
cctagc
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8jla
Contributions of histone tail clipping and acetylation in nucleosome transcription by RNA polymerase II.
Resolution
3.44 Å
Binding residue
(original residue number in PDB)
Y42 G53 I54 S55 S56 R86 S87 T88
Binding residue
(residue number reindexed from 1)
Y11 G22 I23 S24 S25 R55 S56 T57
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0030527
structural constituent of chromatin
GO:0046982
protein heterodimerization activity
Cellular Component
GO:0000786
nucleosome
View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB
RCSB:8jla
,
PDBe:8jla
,
PDBj:8jla
PDBsum
8jla
PubMed
37718728
UniProt
P06899
|H2B1J_HUMAN Histone H2B type 1-J (Gene Name=H2BC11)
[
Back to BioLiP
]