Structure of PDB 5oxv Chain H Binding Site BS02

Receptor Information
>5oxv Chain H (length=93) Species: 8355 (Xenopus laevis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLA
HYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA
Ligand information
>5oxv Chain I (length=311) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
cccctggagaatcccggtgccgaggccgctcaattggtcgtagacagctc
tagcaccgcttaaacgcacgtacgcgctgtcccccgcgttttaaccgcca
aggggattactccctagtctccaggcacgtgtcagatatatacatcctgt
gcagtactcctggagaatcccggtgccgaggccgctcaattggtcgtaga
cagctctagcaccgcttaaacgcacgtacgcgctgtcccccgcgttttaa
ccgccaaggggattactccctagtctccaggcacgtgtcagatatataca
tcctgtgcagt
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5oxv Capturing Structural Heterogeneity in Chromatin Fibers.
Resolution6.721 Å
Binding residue
(original residue number in PDB)		T29 R30 K31 S33 I36 Y37
Binding residue
(residue number reindexed from 1)		T1 R2 K3 S5 I8 Y9
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005694 chromosome

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:5oxv, PDBe:5oxv, PDBj:5oxv
PDBsum5oxv
PubMed28893533
UniProtP02281|H2B11_XENLA Histone H2B 1.1

[Back to BioLiP]