Structure of PDB 5m4o Chain H Binding Site BS02
Receptor Information
>5m4o Chain H (length=332) Species:
436446
(Sphingomonas sp. TTNP3) [
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IIDFGDSKARTDTEHLAINNETGYRSFRAGGFTFTRDEYFARLTWPGGSH
IIPIDAFLRAMMRDVAWGFFYGVVNFDHVFGTINHYGEVTMFAGRFNDAY
RNAGRDHEERFKSSALMAVFKDILSDWTVEGYDPFAAPMETGLPWGIKNG
NNDEAISRQRVTARRMVGLPGDTPVRTDANGFPVNRQFADVPQEQPVVEA
EPGFEAEVSAYNLFGYLSRSDVTWNPSVCSVVGDSLFCPTSEEFILPVEH
GNDRCEWFLQLSDEIVWDVKDKESGKPRARVTARAGDICCMPADIRHQGY
STKRSMLLVWENGSPKIPQMIADGTAPVVPVT
Ligand information
Ligand ID
NPO
InChI
InChI=1S/C6H5NO3/c8-6-3-1-5(2-4-6)7(9)10/h1-4,8H
InChIKey
BTJIUGUIPKRLHP-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
Oc1ccc(cc1)[N+]([O-])=O
ACDLabs 10.04
O=[N+]([O-])c1ccc(O)cc1
OpenEye OEToolkits 1.5.0
c1cc(ccc1[N+](=O)[O-])O
Formula
C6 H5 N O3
Name
P-NITROPHENOL
ChEMBL
CHEMBL14130
DrugBank
DB04417
ZINC
ZINC000034828682
PDB chain
5m4o Chain H Residue 402 [
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Receptor-Ligand Complex Structure
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PDB
5m4o
The crystal structures of native hydroquinone 1,2-dioxygenase from Sphingomonas sp. TTNP3 and of substrate and inhibitor complexes.
Resolution
2.1 Å
Binding residue
(original residue number in PDB)
W75 W232 P234 E250 L254 H258 E264 F266 H305 V317
Binding residue
(residue number reindexed from 1)
W67 W224 P226 E242 L246 H250 E256 F258 H297 V309
Annotation score
1
Enzymatic activity
Enzyme Commision number
1.13.11.-
Gene Ontology
Molecular Function
GO:0046872
metal ion binding
GO:0051213
dioxygenase activity
View graph for
Molecular Function
External links
PDB
RCSB:5m4o
,
PDBe:5m4o
,
PDBj:5m4o
PDBsum
5m4o
PubMed
28232026
UniProt
F8TW83
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