Structure of PDB 4ng3 Chain H Binding Site BS02
Receptor Information
>4ng3 Chain H (length=335) Species:
13689
(Sphingomonas paucimobilis) [
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SLRLIATEEAVTFQPVVDALRAHSRTDDASLDMILVRDVYGDEPARPAMI
GRLSDVTGERLAEMDSNGVDMHLLSLTAPGVQMFDAETGTRLARIANDLM
AQTVAANPTRFAGLGTFAPQDPASAAREIERVATQLRLNGLVINSHTNDL
YYDDPFFHPVFEAIEASGLALYIHPRAPSKQIDRAFRDYGMNSAIWGYGI
ETSTNAVRMILSGLFDRFPRLKIVLGHMGEAIPFWLWRLDYMHGNATTFG
GAPKLKLKPSEYFRRNFAITTSGVESHAALRYSIEVLGPENVMWAIDYPY
QPMAPAVQFIRTAPIPEDVKAMVAGGNAARIFRIT
Ligand information
Ligand ID
1DF
InChI
InChI=1S/C8H7NO6/c1-15-6-3-4(8(11)12)2-5(7(6)10)9(13)14/h2-3,10H,1H3,(H,11,12)
InChIKey
AEDVAGWYAKIOIM-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 12.01
[O-][N+](=O)c1cc(cc(OC)c1O)C(=O)O
CACTVS 3.385
COc1cc(cc(c1O)[N+]([O-])=O)C(O)=O
OpenEye OEToolkits 1.7.6
COc1cc(cc(c1O)[N+](=O)[O-])C(=O)O
Formula
C8 H7 N O6
Name
4-hydroxy-3-methoxy-5-nitrobenzoic acid
ChEMBL
DrugBank
ZINC
ZINC000037011453
PDB chain
4ng3 Chain H Residue 402 [
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Receptor-Ligand Complex Structure
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PDB
4ng3
Crystal structure of 5-carboxyvanillate decarboxylase from Sphingomonas paucimobilis complexed with 4-Hydroxy-3-methoxy-5-nitrobenzoic acid
Resolution
1.751 Å
Binding residue
(original residue number in PDB)
R45 A77 H173 H226 D296 Y299
Binding residue
(residue number reindexed from 1)
R46 A78 H174 H227 D297 Y300
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0016787
hydrolase activity
GO:0016829
lyase activity
GO:0016831
carboxy-lyase activity
GO:0046872
metal ion binding
Biological Process
GO:0019748
secondary metabolic process
Cellular Component
GO:0005737
cytoplasm
GO:0005829
cytosol
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:4ng3
,
PDBe:4ng3
,
PDBj:4ng3
PDBsum
4ng3
PubMed
UniProt
Q8RJ47
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