Structure of PDB 4e2s Chain H Binding Site BS02
Receptor Information
>4e2s Chain H (length=258) Species:
3702
(Arabidopsis thaliana) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
PIYWKATNPTLSPSHLQDLPGFTRSVYKRDHALITPESHVYSPLPDWTNT
LGAYLITPATGSHFVMYLAKMKEMSSSGLPPQDIERLIFVVEGAVTLTNS
SSKKLTVDSYAYLPPNFHHSLDCVESATLVVFERRYEYLGSHTTELIVGS
TDKQPLLETPGEVFELRKLLPMSVAYDFNIHTMDFQPGEFLNVKEVHYNQ
HGLLLLEGQGIYRLGDNWYPVQAGDVIWMAPFVPQWYAALGKTRSRYLLY
KDVNRNPL
Ligand information
Ligand ID
UGY
InChI
InChI=1S/C3H7N3O3/c4-1(2(7)8)6-3(5)9/h1H,4H2,(H,7,8)(H3,5,6,9)/t1-/m0/s1
InChIKey
VTFWFHCECSOPSX-SFOWXEAESA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
C(C(=O)O)(N)NC(=O)N
OpenEye OEToolkits 1.7.6
[C@H](C(=O)O)(N)NC(=O)N
ACDLabs 12.01
O=C(N)NC(N)C(=O)O
CACTVS 3.370
N[C@@H](NC(N)=O)C(O)=O
CACTVS 3.370
N[CH](NC(N)=O)C(O)=O
Formula
C3 H7 N3 O3
Name
(2S)-amino(carbamoylamino)ethanoic acid;
(S)-2-ureidoglycine
ChEMBL
DrugBank
ZINC
PDB chain
4e2s Chain H Residue 302 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4e2s
Structural and functional insights into (S)-ureidoglycine aminohydrolase, key enzyme of purine catabolism in Arabidopsis thaliana
Resolution
2.59 Å
Binding residue
(original residue number in PDB)
M223 E235 H241 Y252 Q275 Y287
Binding residue
(residue number reindexed from 1)
M183 E195 H201 Y212 Q235 Y247
Annotation score
5
Enzymatic activity
Enzyme Commision number
3.5.3.26
: (S)-ureidoglycine aminohydrolase.
Gene Ontology
Molecular Function
GO:0003700
DNA-binding transcription factor activity
GO:0016787
hydrolase activity
GO:0046872
metal ion binding
GO:0071522
ureidoglycine aminohydrolase activity
Biological Process
GO:0000256
allantoin catabolic process
GO:0006144
purine nucleobase metabolic process
GO:0006145
purine nucleobase catabolic process
GO:0006355
regulation of DNA-templated transcription
GO:0010136
ureide catabolic process
Cellular Component
GO:0005783
endoplasmic reticulum
GO:0005829
cytosol
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:4e2s
,
PDBe:4e2s
,
PDBj:4e2s
PDBsum
4e2s
PubMed
22493446
UniProt
Q8GXV5
|UGHY_ARATH (S)-ureidoglycine aminohydrolase (Gene Name=UGLYAH)
[
Back to BioLiP
]