Structure of PDB 3rmm Chain H Binding Site BS02
Receptor Information
>3rmm Chain H (length=251) Species:
9606
(Homo sapiens) [
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IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPW
DKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDI
ALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETGQP
SVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGG
PFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQF
G
Ligand information
>3rmm Chain I (length=11) Species:
6421
(Hirudo medicinalis) [
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DFEEIPEEYLQ
Receptor-Ligand Complex Structure
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PDB
3rmm
Ligand binding stepwise disrupts water network in thrombin: enthalpic and entropic changes reveal classical hydrophobic effect
Resolution
1.58 Å
Binding residue
(original residue number in PDB)
F34 L65 R73 T74 R75 Y76 K81 I82 M84
Binding residue
(residue number reindexed from 1)
F19 L60 R68 T69 R70 Y71 K77 I78 M80
Enzymatic activity
Enzyme Commision number
3.4.21.5
: thrombin.
Gene Ontology
Molecular Function
GO:0004252
serine-type endopeptidase activity
GO:0005509
calcium ion binding
Biological Process
GO:0006508
proteolysis
GO:0007596
blood coagulation
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Molecular Function
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Biological Process
External links
PDB
RCSB:3rmm
,
PDBe:3rmm
,
PDBj:3rmm
PDBsum
3rmm
PubMed
22612268
UniProt
P00734
|THRB_HUMAN Prothrombin (Gene Name=F2)
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