Structure of PDB 1tmu Chain H Binding Site BS02
Receptor Information
>1tmu Chain H (length=257) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPW
DKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDI
ALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTA
NVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDA
CEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWI
QKVIDQF
Ligand information
>1tmu Chain J (length=11) Species:
6421
(Hirudo medicinalis) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
DFEEIPEEYLQ
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1tmu
Changes in interactions in complexes of hirudin derivatives and human alpha-thrombin due to different crystal forms.
Resolution
2.5 Å
Binding residue
(original residue number in PDB)
F34 K36 R67 R73 T74 R75 Y76 R77A K81 I82 M84
Binding residue
(residue number reindexed from 1)
F19 K21 R62 R68 T69 R70 Y71 R73 K77 I78 M80
Enzymatic activity
Enzyme Commision number
3.4.21.5
: thrombin.
Gene Ontology
Molecular Function
GO:0004252
serine-type endopeptidase activity
GO:0005509
calcium ion binding
Biological Process
GO:0006508
proteolysis
GO:0007596
blood coagulation
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:1tmu
,
PDBe:1tmu
,
PDBj:1tmu
PDBsum
1tmu
PubMed
8251938
UniProt
P00734
|THRB_HUMAN Prothrombin (Gene Name=F2)
[
Back to BioLiP
]