Structure of PDB 8h2t Chain G Binding Site BS02
Receptor Information
>8h2t Chain G (length=435) Species:
34073
(Variovorax paradoxus) [
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SYRDNPDAIRALVQDDRVHRDLYTSQELFELEQEHFFANTWNYVGHESQL
PKPGDWISNEIAGRPLIVARHSDGSVRAMMNRCAHKGSRLVNGPCGNTGK
FFRCPYHAWTFKTDGSLLAIPLKTGYENTALHECESAKGLTTLRYVRSHR
GFIFVKISDAGPDFDDYFGDSLSSIDNMADRSPEGELEIAGGCLRFMHQC
NWKMFVENLNDTMHPMVAHESSAGTAKRMWADKPEDEPKPMAVEQFAPFM
SDYKFFEDMGIRTYDNGHSFTGVHFSIHSKYKAIPAYDDAMKARYGEAKT
AQILGMARHNTVYYPNLTIKGAIQAIRVVKPISADRTLIESWTFRLKGAP
PELLQRTTMYNRLINSPFSVVGHDDLQAYRGMQAGLHASGNEWVSLHRNY
DPSELKGGEITTGGTNELPMRNQYRAWVQRMTETM
Ligand information
Ligand ID
IAC
InChI
InChI=1S/C10H9NO2/c12-10(13)5-7-6-11-9-4-2-1-3-8(7)9/h1-4,6,11H,5H2,(H,12,13)
InChIKey
SEOVTRFCIGRIMH-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
c1ccc2c(c1)c(c[nH]2)CC(=O)O
ACDLabs 12.01
O=C(O)Cc2c1ccccc1nc2
CACTVS 3.370
OC(=O)Cc1c[nH]c2ccccc12
Formula
C10 H9 N O2
Name
1H-INDOL-3-YLACETIC ACID;
INDOLE ACETIC ACID
ChEMBL
CHEMBL82411
DrugBank
DB07950
ZINC
ZINC000000083860
PDB chain
8h2t Chain G Residue 502 [
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Receptor-Ligand Complex Structure
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PDB
8h2t
cryo-EM structure of a bacterial dioxygenase
Resolution
2.59 Å
Binding residue
(original residue number in PDB)
N210 L211 D213 H216 P217 F251 K322 Y362
Binding residue
(residue number reindexed from 1)
N208 L209 D211 H214 P215 F249 K320 Y360
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005506
iron ion binding
GO:0016491
oxidoreductase activity
GO:0046872
metal ion binding
GO:0051537
2 iron, 2 sulfur cluster binding
Biological Process
GO:0044237
cellular metabolic process
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Molecular Function
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Biological Process
External links
PDB
RCSB:8h2t
,
PDBe:8h2t
,
PDBj:8h2t
PDBsum
8h2t
PubMed
37459330
UniProt
C5CSP6
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