Structure of PDB 8atf Chain G Binding Site BS02

Receptor Information
>8atf Chain G (length=442) Species: 209285 (Thermochaetoides thermophila) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EVAQPKLLNCQLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTVQSISV
MAYLAERYDIWGPFLVVAPASTLHNWQQEVSKFVPDFKVLPYWGTAADRK
VLRKFWDRKHTTYKKDSPFHVMITSYQLVVSDVAYFQKMKWQYMILDEAQ
AIKSSQSSRWKCLLGFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDS
HDEFSENEDQLKRLHMILKPFMLRRVKKHVQKELGDKIEIDVFCELSYRQ
RAMYQSLRNQNLVMQFRKVCNHPDLFERADTVPSMARFVTDSGKLAKLDE
LLRELKEGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGSTKLEDRRD
TVADFQTRPEIFIFLLSTRAGGLGINLTTADTVIFYDSDWNPTIDSQAMD
RAHRLGQTKQVTVYRLITRGTIEERIRKRALQKEEVQRVVIT
Ligand information
>8atf Chain L (length=143) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ggatgtatatatctgacacgtgcctggagactagggagtaatccccttgg
cggttaaaacgcgggggacagcgcgtacgtgcgtttaagcggtgctagag
ctgtctacgaccaattgagcggcctcggcaccgggattctcca
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8atf Structural mechanism of extranucleosomal DNA readout by the INO80 complex.
Resolution3.45 Å
Binding residue
(original residue number in PDB)
R1059 K1060 R1063 Y1095 M1262 T1579 G1601 R1608 S1627 A1630
Binding residue
(residue number reindexed from 1)
R99 K100 R103 Y135 M264 T319 G341 R348 S367 A370
Gene Ontology
--> -->
 
 
UnboundLocalError
Python 3.6.8: /usr/bin/python3
Tue Nov 26 08:32:06 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '8atf', asym_id = 'G', bs = 'BS02', title = 'Structural mechanism of extranucleosomal DNA readout by the INO80 complex.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='8atf', asym_id='G', bs='BS02', title='Structural mechanism of extranucleosomal DNA readout by the INO80 complex.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0003677,0005524,0005634,0006281,0006338,0006351,0031011,0140658', uniprot = '', pdbid = '8atf', asym_id = 'G'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003677,0005524,0005634,0006281,0006338,0006351,0031011,0140658', uniprot='', pdbid='8atf', asym_id='G')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>